miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|32543155|gb|CD859339.1|CD859339 TGCTCATGCTTCTACAGAAGGTGTTGCTAAATACTTGAAGCCCTCTGTTGCAGGATTCCTCATGTAGAAGGAGCTTGATT
ATCTAGTTGGAGCTGTGTCAAACCCCAAGAAACCGTTTGCTGCCATTGTTGGTGGTTCTAAGGTGTCTTCCAAGATTGGA
GTTATTGAATCCTTGTTGGAGAAGGTTGACATTCTCTTGCTTGGTGGAGGAATGGTGTTTACCTTTTACAAAGCTCAAGG
TTATTCAGTTGGGACCTCTCTTGTGGAGGAAGACAAGCTTGGTCTTGCAACTTCACTTATTGAGAAAGCCAAGGCTAAAG
GAGTTTCCCTTTTGCTTCCAACTGATGTGGTTATAGCTGACAAGTTTTCTGCTGATGCTAACGACAA




Most similar to sp|Q42962|PGKY_TOBAC

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q42962|PGKY_TOBAC Phosphoglycerate kinase, cytosolic
           OS=Nicotiana tabacum PE=2 SV=1
          Length = 401

 Score =  226 bits (577), Expect = 3e-59
 Identities = 116/127 (91%), Positives = 125/127 (98%)
 Frame = +2

Query: 2   AHASTEGVAKYLKPSVAGFLM*KELDYLVGAVSNPKKPFAAIVGGSKVSSKIGVIESLLE 181
           AHASTEGVAKYLKP+VAGFLM KELDYLVGAV+NP+KPFAAIVGGSKVSSKIGVIESLLE
Sbjct: 156 AHASTEGVAKYLKPAVAGFLMQKELDYLVGAVANPQKPFAAIVGGSKVSSKIGVIESLLE 215

Query: 182 KVDILLLGGGMVFTFYKAQGYSVGTSLVEEDKLGLATSLIEKAKAKGVSLLLPTDVVIAD 361
           KVD+LLLGGGM+FTFYKAQGY+VG+SLVEEDKL LATSL+EKAKAKGVSLLLPTDVVIAD
Sbjct: 216 KVDVLLLGGGMIFTFYKAQGYAVGSSLVEEDKLDLATSLMEKAKAKGVSLLLPTDVVIAD 275

Query: 362 KFSADAN 382
           KF+ADAN
Sbjct: 276 KFAADAN 282